Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001743465_00235 | GCA_001743465_01683 | GCA_001743465_00235 | GCA_001743465_01683 | Unannotated protein. | Unannotated protein. | 0.423 |
GCA_001743465_00235 | GCA_001743465_03683 | GCA_001743465_00235 | GCA_001743465_03683 | Unannotated protein. | Unannotated protein. | 0.559 |
GCA_001743465_00235 | GCA_001743465_03977 | GCA_001743465_00235 | GCA_001743465_03977 | Unannotated protein. | Unannotated protein. | 0.929 |
GCA_001743465_00235 | GCA_001743465_04117 | GCA_001743465_00235 | GCA_001743465_04117 | Unannotated protein. | Unannotated protein. | 0.984 |
GCA_001743465_00235 | HA41_02455 | GCA_001743465_00235 | GCA_001743465_00392 | Unannotated protein. | Unannotated protein. | 0.969 |
GCA_001743465_00235 | HA41_13135 | GCA_001743465_00235 | GCA_001743465_03978 | Unannotated protein. | Unannotated protein; Member of a two-component regulatory system. | 0.726 |
GCA_001743465_00235 | HA41_19480 | GCA_001743465_00235 | GCA_001743465_04064 | Unannotated protein. | Unannotated protein. | 0.517 |
GCA_001743465_00235 | rcsC | GCA_001743465_00235 | GCA_001743465_04644 | Unannotated protein. | Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.413 |
GCA_001743465_01683 | GCA_001743465_00235 | GCA_001743465_01683 | GCA_001743465_00235 | Unannotated protein. | Unannotated protein. | 0.423 |
GCA_001743465_01683 | GCA_001743465_03683 | GCA_001743465_01683 | GCA_001743465_03683 | Unannotated protein. | Unannotated protein. | 0.441 |
GCA_001743465_01683 | GCA_001743465_03977 | GCA_001743465_01683 | GCA_001743465_03977 | Unannotated protein. | Unannotated protein. | 0.811 |
GCA_001743465_01683 | GCA_001743465_04117 | GCA_001743465_01683 | GCA_001743465_04117 | Unannotated protein. | Unannotated protein. | 0.987 |
GCA_001743465_01683 | HA41_02455 | GCA_001743465_01683 | GCA_001743465_00392 | Unannotated protein. | Unannotated protein. | 0.963 |
GCA_001743465_01683 | HA41_13135 | GCA_001743465_01683 | GCA_001743465_03978 | Unannotated protein. | Unannotated protein; Member of a two-component regulatory system. | 0.402 |
GCA_001743465_01683 | rcsC | GCA_001743465_01683 | GCA_001743465_04644 | Unannotated protein. | Unannotated protein; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB. | 0.506 |
GCA_001743465_03683 | GCA_001743465_00235 | GCA_001743465_03683 | GCA_001743465_00235 | Unannotated protein. | Unannotated protein. | 0.559 |
GCA_001743465_03683 | GCA_001743465_01683 | GCA_001743465_03683 | GCA_001743465_01683 | Unannotated protein. | Unannotated protein. | 0.441 |
GCA_001743465_03683 | GCA_001743465_03977 | GCA_001743465_03683 | GCA_001743465_03977 | Unannotated protein. | Unannotated protein. | 0.969 |
GCA_001743465_03683 | GCA_001743465_04117 | GCA_001743465_03683 | GCA_001743465_04117 | Unannotated protein. | Unannotated protein. | 0.937 |
GCA_001743465_03683 | HA41_02455 | GCA_001743465_03683 | GCA_001743465_00392 | Unannotated protein. | Unannotated protein. | 0.893 |
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