Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001743465_00441 | HA41_03660 | GCA_001743465_00441 | GCA_001743465_00341 | Unannotated protein. | Unannotated protein. | 0.509 |
GCA_001743465_00441 | HA41_19525 | GCA_001743465_00441 | GCA_001743465_04073 | Unannotated protein. | Unannotated protein. | 0.615 |
GCA_001743465_00441 | HA41_20125 | GCA_001743465_00441 | GCA_001743465_04188 | Unannotated protein. | Unannotated protein. | 0.926 |
GCA_001743465_04534 | HA41_03660 | GCA_001743465_04534 | GCA_001743465_00341 | Unannotated protein. | Unannotated protein. | 0.600 |
GCA_001743465_04534 | HA41_19525 | GCA_001743465_04534 | GCA_001743465_04073 | Unannotated protein. | Unannotated protein. | 0.513 |
GCA_001743465_04534 | HA41_19530 | GCA_001743465_04534 | GCA_001743465_04074 | Unannotated protein. | Unannotated protein. | 0.651 |
GCA_001743465_04534 | glmM | GCA_001743465_04534 | GCA_001743465_04162 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.578 |
GCA_001743465_04534 | glmS | GCA_001743465_04534 | GCA_001743465_03561 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.733 |
GCA_001743465_04534 | murQ | GCA_001743465_04534 | GCA_001743465_04043 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. | 0.512 |
GCA_001743465_04534 | nagB | GCA_001743465_04534 | GCA_001743465_00342 | Unannotated protein. | Unannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.562 |
HA41_03660 | GCA_001743465_00441 | GCA_001743465_00341 | GCA_001743465_00441 | Unannotated protein. | Unannotated protein. | 0.509 |
HA41_03660 | GCA_001743465_04534 | GCA_001743465_00341 | GCA_001743465_04534 | Unannotated protein. | Unannotated protein. | 0.600 |
HA41_03660 | HA41_19525 | GCA_001743465_00341 | GCA_001743465_04073 | Unannotated protein. | Unannotated protein. | 0.982 |
HA41_03660 | HA41_19530 | GCA_001743465_00341 | GCA_001743465_04074 | Unannotated protein. | Unannotated protein. | 0.732 |
HA41_03660 | HA41_20125 | GCA_001743465_00341 | GCA_001743465_04188 | Unannotated protein. | Unannotated protein. | 0.526 |
HA41_03660 | glmM | GCA_001743465_00341 | GCA_001743465_04162 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.975 |
HA41_03660 | glmS | GCA_001743465_00341 | GCA_001743465_03561 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.969 |
HA41_03660 | murQ | GCA_001743465_00341 | GCA_001743465_04043 | Unannotated protein. | Unannotated protein; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. Together with AnmK, is also required for the utilization of anhydro-N-acetylmuramic acid (anhMurNAc) either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the GCKR-like family. MurNAc-6-P etherase subfamily. | 0.997 |
HA41_03660 | nagB | GCA_001743465_00341 | GCA_001743465_00342 | Unannotated protein. | Unannotated protein; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. | 0.999 |
HA41_19520 | HA41_19525 | GCA_001743465_04072 | GCA_001743465_04073 | Unannotated protein. | Unannotated protein. | 0.726 |
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