Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001743465_01624 | HA41_04110 | GCA_001743465_01624 | GCA_001743465_04672 | Unannotated protein. | Unannotated protein. | 0.778 |
GCA_001743465_01624 | HA41_08180 | GCA_001743465_01624 | GCA_001743465_00707 | Unannotated protein. | Unannotated protein. | 0.537 |
GCA_001743465_01624 | HA41_10020 | GCA_001743465_01624 | GCA_001743465_04297 | Unannotated protein. | Unannotated protein. | 0.596 |
GCA_001743465_01624 | HA41_16030 | GCA_001743465_01624 | GCA_001743465_04625 | Unannotated protein. | Unannotated protein. | 0.736 |
GCA_001743465_01624 | HA41_16035 | GCA_001743465_01624 | GCA_001743465_04624 | Unannotated protein. | Unannotated protein; Belongs to the UPF0352 family. | 0.739 |
GCA_001743465_01624 | HA41_16040 | GCA_001743465_01624 | GCA_001743465_04623 | Unannotated protein. | Unannotated protein. | 0.720 |
GCA_001743465_01624 | HA41_16480 | GCA_001743465_01624 | GCA_001743465_03162 | Unannotated protein. | Unannotated protein. | 0.533 |
GCA_001743465_01624 | rraB | GCA_001743465_01624 | GCA_001743465_04202 | Unannotated protein. | Unannotated protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.729 |
GCA_001743465_01624 | syd | GCA_001743465_01624 | GCA_001743465_04398 | Unannotated protein. | Unannotated protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | 0.805 |
HA41_04110 | GCA_001743465_01624 | GCA_001743465_04672 | GCA_001743465_01624 | Unannotated protein. | Unannotated protein. | 0.778 |
HA41_04110 | HA41_08180 | GCA_001743465_04672 | GCA_001743465_00707 | Unannotated protein. | Unannotated protein. | 0.539 |
HA41_04110 | HA41_16030 | GCA_001743465_04672 | GCA_001743465_04625 | Unannotated protein. | Unannotated protein. | 0.714 |
HA41_04110 | HA41_16035 | GCA_001743465_04672 | GCA_001743465_04624 | Unannotated protein. | Unannotated protein; Belongs to the UPF0352 family. | 0.763 |
HA41_04110 | HA41_16040 | GCA_001743465_04672 | GCA_001743465_04623 | Unannotated protein. | Unannotated protein. | 0.676 |
HA41_04110 | HA41_16480 | GCA_001743465_04672 | GCA_001743465_03162 | Unannotated protein. | Unannotated protein. | 0.545 |
HA41_04110 | rraB | GCA_001743465_04672 | GCA_001743465_04202 | Unannotated protein. | Unannotated protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.760 |
HA41_04110 | syd | GCA_001743465_04672 | GCA_001743465_04398 | Unannotated protein. | Unannotated protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family. | 0.757 |
HA41_08180 | GCA_001743465_01624 | GCA_001743465_00707 | GCA_001743465_01624 | Unannotated protein. | Unannotated protein. | 0.537 |
HA41_08180 | HA41_04110 | GCA_001743465_00707 | GCA_001743465_04672 | Unannotated protein. | Unannotated protein. | 0.539 |
HA41_08180 | HA41_16035 | GCA_001743465_00707 | GCA_001743465_04624 | Unannotated protein. | Unannotated protein; Belongs to the UPF0352 family. | 0.534 |
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