STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nhal_0010PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: noc:Noc_2506 multicopper oxidase, type 3. (567 aa)    
Predicted Functional Partners:
Nhal_0672
KEGG: noc:Noc_2505 hypothetical protein.
 
 
   0.851
Nhal_1176
PFAM: putative thiol-disulphide oxidoreductase DCC; SMART: HTTM domain protein; KEGG: noc:Noc_2136 hypothetical protein.
  
     0.765
Nhal_0677
TIGRFAM: methane monooxygenase/ammonia monooxygenase, subunit B; PFAM: Ammonia monooxygenase/methane monooxygenase subunit B; KEGG: noc:Noc_2501 monooxygenase subunit B protein.
  
     0.736
Nhal_0676
TIGRFAM: methane monooxygenase/ammonia monooxygenase, subunit A; PFAM: Ammonia monooxygenase/methane monooxygenase subunit A; KEGG: noc:Noc_2502 ammonia monooxygenase.
  
   
 0.733
Nhal_1109
KEGG: noc:Noc_0915 hypothetical protein.
  
     0.730
Nhal_0675
TIGRFAM: methane monooxygenase/ammonia monooxygenase, subunit C; PFAM: Ammonia monooxygenase/methane monooxygenase subunit C; KEGG: noc:Noc_2503 ammonia monooxygenase/methane monooxygenase, subunit C.
  
     0.728
Nhal_2591
KEGG: noc:Noc_1224 hypothetical protein.
  
     0.727
Nhal_0644
KEGG: noc:Noc_2529 hypothetical protein.
  
     0.721
Nhal_3134
PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: noc:Noc_1624 signal transduction histidine kinase.
  
     0.690
Nhal_0437
PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: neu:NE0782 putative periplasmic cell division protein (SufI).
  
     0.687
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.