Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Nhal_0397PFAM: acylneuraminate cytidylyltransferase; KEGG: aeh:Mlg_2324 acylneuraminate cytidylyltransferase. (241 aa)    
Predicted Functional Partners:
Nhal_0399
PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: pfo:Pfl01_1523 N-acetylneuraminate synthase.
 
 
 0.988
Nhal_0398
PFAM: GCN5-related N-acetyltransferase; KEGG: pfo:Pfl01_1522 GCN5-related N-acetyltransferase.
 
   
 0.972
Nhal_0396
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: har:HEAR1121 putative polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.940
Nhal_0393
PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: gme:Gmet_0458 polysaccharide biosynthesis protein CapD.
 
  
 0.902
Nhal_0395
Hypothetical protein.
       0.773
Nhal_0400
Hypothetical protein; KEGG: rfr:Rfer_0680 heparinase II/III-like.
       0.743
Nhal_0402
PFAM: Heparinase II/III family protein; KEGG: hypothetical protein.
       0.675
Nhal_0394
PFAM: protein of unknown function DUF343; KEGG: sdn:Sden_1760 methyltransferase type 11.
       0.664
Nhal_0401
Transposase mutator type; Required for the transposition of the insertion element.
       0.661
Nhal_3236
KEGG: noc:Noc_1976 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.621
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
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