STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nhal_0804PFAM: protein of unknown function UPF0150; KEGG: noc:Noc_1108 hypothetical protein. (70 aa)    
Predicted Functional Partners:
Nhal_0266
PFAM: protein of unknown function UPF0150; KEGG: noc:Noc_1108 hypothetical protein.
  
     0.747
Nhal_1261
PFAM: protein of unknown function UPF0150; KEGG: noc:Noc_1108 hypothetical protein.
  
     0.680
Nhal_2519
KEGG: gbm:Gbem_3668 HicB family protein.
  
     0.618
Nhal_2520
PFAM: YcfA family protein; KEGG: noc:Noc_0412 hypothetical protein.
  
 
   0.568
Nhal_2525
Hypothetical protein.
  
     0.493
Nhal_0904
PFAM: protein of unknown function DUF820; KEGG: noc:Noc_1566 hypothetical protein.
  
     0.470
Nhal_2048
PFAM: YcfA family protein; KEGG: rpb:RPB_4579 YcfA-like.
  
 
   0.470
Nhal_2801
KEGG: dat:HRM2_22640 TPR domain protein.
  
     0.464
Nhal_2526
KEGG: afe:Lferr_0673 hypothetical protein.
  
     0.423
Nhal_2859
PFAM: YcfA family protein; KEGG: ype:YPO1818 hypothetical protein.
  
 
   0.419
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.