STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nhal_1069Hypothetical protein; KEGG: dar:Daro_2260 cytochrome c family protein. (197 aa)    
Predicted Functional Partners:
Nhal_3042
KEGG: noc:Noc_1766 cytochrome c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.964
Nhal_3860
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.925
Nhal_2603
KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.921
Nhal_3041
TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: noc:Noc_1767 cytochrome c oxidase, subunit II.
 
 
 0.916
Nhal_3861
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.868
Nhal_2430
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mca:MCA2577 dehydrogenase subunit, putative.
   
 
 0.826
nuoC
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
   0.809
Nhal_1556
Nitric-oxide reductase; PFAM: cytochrome c oxidase subunit I; KEGG: noc:Noc_1849 cytochrome c oxidase, subunit I.
  
 
 0.773
Nhal_2604
PFAM: Polysulphide reductase NrfD; KEGG: noc:Noc_1239 polysulphide reductase, NrfD.
 
 
 
 0.765
Nhal_2602
KEGG: noc:Noc_1237 chaperone protein HtpG.
   
 
 0.739
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.