Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Nhal_2575PFAM: protein of unknown function DUF46; KEGG: noc:Noc_0421 hypothetical protein. (192 aa)    
Predicted Functional Partners:
Nhal_2574
PFAM: metallophosphoesterase; KEGG: noc:Noc_0403 metallophosphoesterase.
 
     0.887
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.769
Nhal_3650
KEGG: noc:Noc_0759 general secretion pathway protein.
  
     0.630
Nhal_3649
KEGG: noc:Noc_0760 hypothetical protein.
  
     0.576
Nhal_3787
PFAM: protein of unknown function DUF6 transmembrane; KEGG: mms:mma_0700 transporter of the DMT superfamily.
   
   0.574
Nhal_1185
PFAM: bifunctional deaminase-reductase domain protein; KEGG: noc:Noc_2131 pyrimidine reductase, riboflavin biosynthesis, RibD.
  
     0.570
Nhal_3651
PFAM: Fimbrial assembly family protein; KEGG: noc:Noc_0758 general secretion pathway protein L.
  
     0.538
Nhal_2040
PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: noc:Noc_2148 heat shock protein DnaJ-like.
  
     0.500
Nhal_0443
KEGG: noc:Noc_2891 general secretion pathway protein H.
  
     0.484
Nhal_3133
KEGG: noc:Noc_1625 putative lipoprotein.
  
     0.482
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
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