STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nhal_2654PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: noc:Noc_0964 stage II sporulation E. (247 aa)    
Predicted Functional Partners:
Nhal_0406
PFAM: ATP-binding region ATPase domain protein; KEGG: noc:Noc_2977 anti-sigma regulatory factor (Ser/Thr protein kinase.
 
 
 0.945
Nhal_1407
Diguanylate cyclase; KEGG: noc:Noc_1271 hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; Hpt domain protein; GGDEF domain containing protein; response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: EAL domain protein; GGDEF domain containing protein; Hpt domain protein; histidine kinase A domain protein; response regulator receiver; histidine kinase HAMP region domain protein; ATP-binding regi [...]
 
  
 0.923
Nhal_1225
Diguanylate cyclase; KEGG: noc:Noc_1758 PAS sensor diguanylate cyclase/phophodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS domain containing protein.
  
  
 0.880
Nhal_0407
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: noc:Noc_2976 anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.833
Nhal_0222
Diguanylate cyclase; KEGG: noc:Noc_0376 multisensor diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; response regulator receiver; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein.
  
  
 0.813
Nhal_0521
Diguanylate cyclase; KEGG: noc:Noc_2682 PAS sensor diguanylate cyclase/phophodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein.
  
  
 0.813
Nhal_2332
Flagellar rod assembly protein/muramidase FlgJ; KEGG: noc:Noc_2370 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2.
   
    0.802
Nhal_1223
PFAM: Stage II sporulation E family protein; Forkhead-associated protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; Forkhead-associated protein; GAF domain protein; KEGG: sfu:Sfum_2453 serine phosphatase.
 
  
 0.797
Nhal_2346
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.766
Nhal_3619
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
    0.760
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
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