Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Nhal_2802PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: noc:Noc_2032 glycerate dehydrogenase. (318 aa)    
Predicted Functional Partners:
Nhal_2764
PFAM: aminotransferase class V; KEGG: noc:Noc_2128 aminotransferase, class V.
  
 
 0.921
gph
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
 
  
 0.917
Nhal_2670
PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_0844 glycolate oxidase FAD binding subunit.
   
 0.915
Nhal_2761
PFAM: FAD linked oxidase domain protein; KEGG: noc:Noc_0495 D-lactate dehydrogenase (cytochrome).
   
 0.915
Nhal_2762
KEGG: noc:Noc_0494 kinase-like.
  
 
 0.913
Nhal_0846
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: noc:Noc_0937 hypothetical protein.
    
 0.906
Nhal_2667
PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: noc:Noc_0841 glycolate oxidase iron-sulfur subunit.
    
 0.906
Nhal_2635
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: noc:Noc_0178 HAD family hydrolase.
    
  0.905
Nhal_1352
Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), Phosphate acetyltransferase; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: noc:Noc_1582 malic enzyme.
   
 
 0.679
Nhal_2091
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: noc:Noc_1719 phosphoglucomutase.
  
   0.650
Your Current Organism:
Nitrosococcus halophilus
NCBI taxonomy Id: 472759
Other names: N. halophilus Nc 4, Nitrosococcus halophilus Nc 4, Nitrosococcus halophilus str. Nc 4, Nitrosococcus halophilus strain Nc 4
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