STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIJ21401.1Spore germination protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (542 aa)    
Predicted Functional Partners:
OIJ21402.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.949
OIJ21403.1
Spore gernimation protein KB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.919
OIJ20809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
OIJ20077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.782
OIJ21805.1
Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.779
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.777
OIJ20827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.777
OIJ20518.1
Stage V sporulation protein T; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OIJ20319.1
SpoIVB peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.774
OIJ20078.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.774
Your Current Organism:
Anaerobacillus alkalidiazotrophicus
NCBI taxonomy Id: 472963
Other names: A. alkalidiazotrophicus, Anaerobacillus alkalidiazotrophicus (Sorokin et al. 2008) Zavarzina et al. 2010, Bacillus alkalidiazotrophicus, Bacillus alkalidiazotrophicus Sorokin et al. 2008, DSM 22531, NCCB 100213, UNIQEM U377, strain MS 6
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