STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000000079annotation not available (58 aa)    
Predicted Functional Partners:
ENSNMLP00000043978
Serine and arginine rich splicing factor 3a.
   
 0.995
ENSNMLP00000016515
Serine and arginine rich splicing factor 1b.
   
 0.989
ENSNMLP00000020907
Serine and arginine rich splicing factor 1a.
   
 0.989
ENSNMLP00000040917
Transformer 2 beta homolog.
   
 0.988
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.987
ENSNMLP00000021825
annotation not available
   
 0.976
ENSNMLP00000001085
annotation not available
   
 0.953
ENSNMLP00000021070
annotation not available
   
 0.929
ENSNMLP00000035988
Serine and arginine rich splicing factor 2a.
   
 0.929
ENSNMLP00000005930
U2 small nuclear RNA auxiliary factor 2a.
   
 0.916
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.