STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000000126Collagen and calcium binding EGF domains 1. (397 aa)    
Predicted Functional Partners:
ENSNMLP00000032705
Vascular endothelial growth factor c.
    
 0.681
ENSNMLP00000028760
annotation not available
   
  0.638
ENSNMLP00000003073
annotation not available
    
 0.637
ENSNMLP00000020215
annotation not available
    
 0.574
ENSNMLP00000020221
annotation not available
    
 0.574
ENSNMLP00000020226
annotation not available
    
 0.574
ENSNMLP00000019939
annotation not available
    
 0.564
ENSNMLP00000038794
annotation not available
    
 0.564
ENSNMLP00000038797
annotation not available
    
 0.564
ENSNMLP00000001168
annotation not available
    
 0.531
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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