STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000000163Ss18, like 2. (92 aa)    
Predicted Functional Partners:
ENSNMLP00000042517
PHD finger protein 10.
    
 0.929
ENSNMLP00000002357
Actin-like 6A.
    
 0.928
ENSNMLP00000032257
AT rich interactive domain 2 (ARID, RFX-like).
    
 0.924
ENSNMLP00000018774
BAF chromatin remodeling complex subunit BCL7A.
    
 0.917
ENSNMLP00000029770
BAF chromatin remodeling complex subunit BCL7B b.
    
 0.917
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.907
ENSNMLP00000041632
annotation not available
    
 0.907
ENSNMLP00000003308
annotation not available
    
 0.892
ENSNMLP00000010378
AT rich interactive domain 1Aa (SWI-like).
    
 0.892
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
   
 0.880
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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