STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000000365Zinc finger protein 513a. (612 aa)    
Predicted Functional Partners:
ENSNMLP00000012382
annotation not available
    
  0.841
ENSNMLP00000007467
annotation not available
    
  0.593
ENSNMLP00000012380
annotation not available
    
  0.531
ENSNMLP00000016805
BRCA1 associated RING domain 1.
    
  0.518
SPOP
Speckle type BTB/POZ protein.
   
  0.510
ENSNMLP00000015087
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
    
 
 0.510
ENSNMLP00000043865
Speckle type BTB/POZ protein like b.
   
  0.510
ENSNMLP00000015978
annotation not available
    
 
 0.498
ENSNMLP00000043892
Small nuclear ribonucleoprotein 200 (U5).
      
 0.493
YTHDC2
YTH domain containing 2.
    
 0.490
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.