STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000000747LIM domain binding 3a. (359 aa)    
Predicted Functional Partners:
ENSNMLP00000020339
PDZ and LIM domain 7.
 
 
  0.955
ENSNMLP00000024447
PDZ and LIM domain 5b.
 
 
  0.949
ENSNMLP00000024232
annotation not available
    
  0.848
ENSNMLP00000002851
PDZ and LIM domain 2 (mystique).
    
 
0.836
ENSNMLP00000001585
annotation not available
   
 
  0.825
ENSNMLP00000002333
PDZ and LIM domain 3a.
   
 
0.823
ENSNMLP00000003699
PDZ and LIM domain 1 (elfin).
   
 
0.823
ENSNMLP00000023902
annotation not available
    
 0.821
ENSNMLP00000036383
EH domain binding protein 1.
    
 0.821
ENSNMLP00000020698
annotation not available
   
 
  0.789
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.