ENSNMLP00000001348 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000001348

Drebrin-like b. (486 aa)

Predicted Functional Partners:

ENSNMLP00000000377

0.833

ENSNMLP00000021895

0.833

ENSNMLP00000004853

0.822

ENSNMLP00000007083

0.792

ENSNMLP00000036242

0.768

ENSNMLP00000039324

0.768

ENSNMLP00000038517

0.744

ENSNMLP00000003302

0.708

ENSNMLP00000008129

0.708

ENSNMLP00000013815

0.708

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000000377	ENSNMLP00000001348	Cyclase associated actin cytoskeleton regulatory protein 2.	Drebrin-like b.	0.833
ENSNMLP00000000377	ENSNMLP00000004853	Cyclase associated actin cytoskeleton regulatory protein 2.	Capping actin protein of muscle Z-line subunit beta.	0.655
ENSNMLP00000000377	ENSNMLP00000036242	Cyclase associated actin cytoskeleton regulatory protein 2.	Actin related protein 2b.	0.729
ENSNMLP00000000377	ENSNMLP00000039324	Cyclase associated actin cytoskeleton regulatory protein 2.	Zgc:101810.	0.729
ENSNMLP00000001348	ENSNMLP00000000377	Drebrin-like b.	Cyclase associated actin cytoskeleton regulatory protein 2.	0.833
ENSNMLP00000001348	ENSNMLP00000003302	Drebrin-like b.	annotation not available	0.708
ENSNMLP00000001348	ENSNMLP00000004853	Drebrin-like b.	Capping actin protein of muscle Z-line subunit beta.	0.822
ENSNMLP00000001348	ENSNMLP00000007083	Drebrin-like b.	Inner membrane protein, mitochondrial (mitofilin).	0.792
ENSNMLP00000001348	ENSNMLP00000008129	Drebrin-like b.	annotation not available	0.708
ENSNMLP00000001348	ENSNMLP00000013815	Drebrin-like b.	AP2 associated kinase 1b.	0.708
ENSNMLP00000001348	ENSNMLP00000021895	Drebrin-like b.	CAP, adenylate cyclase-associated protein 1 (yeast).	0.833
ENSNMLP00000001348	ENSNMLP00000036242	Drebrin-like b.	Actin related protein 2b.	0.768
ENSNMLP00000001348	ENSNMLP00000038517	Drebrin-like b.	annotation not available	0.744
ENSNMLP00000001348	ENSNMLP00000039324	Drebrin-like b.	Zgc:101810.	0.768
ENSNMLP00000003302	ENSNMLP00000001348	annotation not available	Drebrin-like b.	0.708
ENSNMLP00000003302	ENSNMLP00000038517	annotation not available	annotation not available	0.837
ENSNMLP00000004853	ENSNMLP00000000377	Capping actin protein of muscle Z-line subunit beta.	Cyclase associated actin cytoskeleton regulatory protein 2.	0.655
ENSNMLP00000004853	ENSNMLP00000001348	Capping actin protein of muscle Z-line subunit beta.	Drebrin-like b.	0.822
ENSNMLP00000004853	ENSNMLP00000021895	Capping actin protein of muscle Z-line subunit beta.	CAP, adenylate cyclase-associated protein 1 (yeast).	0.655
ENSNMLP00000004853	ENSNMLP00000036242	Capping actin protein of muscle Z-line subunit beta.	Actin related protein 2b.	0.810