STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000001478Danio rerio leucine-rich repeat containing G protein-coupled receptor 4 (lgr4), mRNA. (799 aa)    
Predicted Functional Partners:
ENSNMLP00000022938
annotation not available
    
 0.964
ENSNMLP00000040996
R-spondin 3.
  
 0.952
ENSNMLP00000035240
R-spondin 4.
  
 0.950
ENSNMLP00000039168
R-spondin 1.
  
 0.950
ENSNMLP00000009655
R-spondin 2.
  
 0.937
RSPO3
R-spondin 3.
  
 0.897
ENSNMLP00000007467
annotation not available
   
 0.890
ENSNMLP00000007437
annotation not available
    
 0.869
ENSNMLP00000014644
annotation not available
    
 0.869
ENSNMLP00000028316
annotation not available
    
 0.869
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.