Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000001546HECT and RLD domain containing E3 ubiquitin protein ligase 4. (1017 aa)    
Predicted Functional Partners:
ENSNMLP00000024605
annotation not available
   
 0.848
ENSNMLP00000022492
annotation not available
   
  0.825
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.779
ENSNMLP00000002523
annotation not available
    
 0.718
ENSNMLP00000024746
annotation not available
     
  0.680
ENSNMLP00000005139
Nuclear transcription factor, X-box binding-like 1.
    
 0.671
ENSNMLP00000036648
Nuclear transcription factor, X-box binding 1.
    
 0.671
ENSNMLP00000021935
Tumor protein p53.
    
 0.668
ENSNMLP00000001079
Ribosomal protein S27a.
    
  0.656
ENSNMLP00000008892
annotation not available
    
 0.645
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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