STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000001619CKLF-like MARVEL transmembrane domain containing 4. (209 aa)    
Predicted Functional Partners:
ENSNMLP00000011288
Dynein, cytoplasmic 1, light intermediate chain 1.
 
    
 0.620
ENSNMLP00000006996
annotation not available
    
 
0.566
ENSNMLP00000040398
CKLF-like MARVEL transmembrane domain containing 3.
      
 0.564
CKLF
Chemokine like factor.
      
 0.560
ENSNMLP00000041503
Zinc finger CCCH-type containing 6.
      
 0.502
ENSNMLP00000034550
RNA polymerase II subunit M.
      
 0.495
ENSNMLP00000013519
Family with sequence similarity 168 member B.
      
 0.465
ENSNMLP00000000591
Brain expressed, associated with NEDD4, 1.
      
 0.446
ENSNMLP00000023730
NHS-like 2.
      
 0.429
ENSNMLP00000001898
Dynein, cytoplasmic 1, light intermediate chain 2.
 
    
 0.417
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.