STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFAP4Transcription factor AP-4. (324 aa)    
Predicted Functional Partners:
ENSNMLP00000001325
Cyclin-dependent kinase inhibitor 1Bb.
     
 0.585
ENSNMLP00000005867
Cyclin-dependent kinase inhibitor 1Cb.
     
 0.585
ENSNMLP00000017779
Cyclin-dependent kinase inhibitor 1A.
     
 0.585
ENSNMLP00000042679
Cyclin-dependent kinase inhibitor 1D.
     
 0.585
BPTF
Bromodomain PHD finger transcription factor.
    
   0.572
ENSNMLP00000043792
annotation not available
    
   0.572
ENSNMLP00000042694
annotation not available
     
 0.560
ENSNMLP00000019048
annotation not available
     
 0.514
ENSNMLP00000005217
TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
      
 0.479
ENSNMLP00000000659
Geminin DNA replication inhibitor.
    
 
 0.461
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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