RCBTB1 protein (Neogobius melanostomus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

RCBTB1

RCC1 and BTB domain containing protein 1. (643 aa)

Predicted Functional Partners:

CUL3

0.808

ENSNMLP00000030280

0.808

ENSNMLP00000002437

0.795

ENSNMLP00000002900

0.795

ENSNMLP00000002906

0.795

ENSNMLP00000002912

0.795

ENSNMLP00000002923

0.795

ENSNMLP00000043735

0.790

ENSNMLP00000008734

0.639

ENSNMLP00000008784

0.639

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL3	RCBTB1	ENSNMLP00000027281	ENSNMLP00000001746	Cullin 3.	RCC1 and BTB domain containing protein 1.	0.808
ENSNMLP00000002437	ENSNMLP00000002900	ENSNMLP00000002437	ENSNMLP00000002900	annotation not available	annotation not available	0.899
ENSNMLP00000002437	ENSNMLP00000002906	ENSNMLP00000002437	ENSNMLP00000002906	annotation not available	annotation not available	0.989
ENSNMLP00000002437	ENSNMLP00000002912	ENSNMLP00000002437	ENSNMLP00000002912	annotation not available	annotation not available	0.989
ENSNMLP00000002437	ENSNMLP00000002923	ENSNMLP00000002437	ENSNMLP00000002923	annotation not available	annotation not available	0.989
ENSNMLP00000002437	ENSNMLP00000043735	ENSNMLP00000002437	ENSNMLP00000043735	annotation not available	NudC domain containing 2.	0.655
ENSNMLP00000002437	RCBTB1	ENSNMLP00000002437	ENSNMLP00000001746	annotation not available	RCC1 and BTB domain containing protein 1.	0.795
ENSNMLP00000002900	ENSNMLP00000002437	ENSNMLP00000002900	ENSNMLP00000002437	annotation not available	annotation not available	0.899
ENSNMLP00000002900	ENSNMLP00000002906	ENSNMLP00000002900	ENSNMLP00000002906	annotation not available	annotation not available	0.899
ENSNMLP00000002900	ENSNMLP00000002912	ENSNMLP00000002900	ENSNMLP00000002912	annotation not available	annotation not available	0.899
ENSNMLP00000002900	ENSNMLP00000002923	ENSNMLP00000002900	ENSNMLP00000002923	annotation not available	annotation not available	0.899
ENSNMLP00000002900	ENSNMLP00000043735	ENSNMLP00000002900	ENSNMLP00000043735	annotation not available	NudC domain containing 2.	0.655
ENSNMLP00000002900	RCBTB1	ENSNMLP00000002900	ENSNMLP00000001746	annotation not available	RCC1 and BTB domain containing protein 1.	0.795
ENSNMLP00000002906	ENSNMLP00000002437	ENSNMLP00000002906	ENSNMLP00000002437	annotation not available	annotation not available	0.989
ENSNMLP00000002906	ENSNMLP00000002900	ENSNMLP00000002906	ENSNMLP00000002900	annotation not available	annotation not available	0.899
ENSNMLP00000002906	ENSNMLP00000002912	ENSNMLP00000002906	ENSNMLP00000002912	annotation not available	annotation not available	0.899
ENSNMLP00000002906	ENSNMLP00000002923	ENSNMLP00000002906	ENSNMLP00000002923	annotation not available	annotation not available	0.989
ENSNMLP00000002906	ENSNMLP00000043735	ENSNMLP00000002906	ENSNMLP00000043735	annotation not available	NudC domain containing 2.	0.655
ENSNMLP00000002906	RCBTB1	ENSNMLP00000002906	ENSNMLP00000001746	annotation not available	RCC1 and BTB domain containing protein 1.	0.795
ENSNMLP00000002912	ENSNMLP00000002437	ENSNMLP00000002912	ENSNMLP00000002437	annotation not available	annotation not available	0.989