STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000002720Mitochondrial elongation factor 1. (473 aa)    
Predicted Functional Partners:
ENSNMLP00000032032
Thyroid hormone responsive.
    
  0.715
ENSNMLP00000001955
Stimulator of interferon response cGAMP interactor 1.
    
 0.599
ENSNMLP00000022578
Si:dkey-103j14.5.
      
 0.549
ENSNMLP00000024534
annotation not available
    
  0.542
ENSNMLP00000029159
IFI30 lysosomal thiol reductase.
    
  0.542
ENSNMLP00000029164
annotation not available
    
  0.542
ENSNMLP00000033992
Family with sequence similarity 166 member B.
    
  0.542
ENSNMLP00000002530
Carbohydrate (chondroitin 4) sulfotransferase 12a.
      
 0.489
ENSNMLP00000002818
Activating transcription factor 4b.
      
 0.489
ENSNMLP00000002548
Interleukin 2 receptor, beta.
      
 0.463
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.