STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000003311Chromosome 9 open reading frame 78. (292 aa)    
Predicted Functional Partners:
ENSNMLP00000005926
pre-mRNA processing factor 8.
    
 
 0.933
ENSNMLP00000043892
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.924
ENSNMLP00000003307
Mediator complex subunit 22.
   
  
 0.888
ENSNMLP00000042593
SLU7 homolog, splicing factor.
   
 
 0.886
ENSNMLP00000008307
annotation not available
   
 
  0.868
ENSNMLP00000020142
CWC22 spliceosome associated protein homolog.
    
 0.821
ENSNMLP00000025429
Family with sequence similarity 50 member A.
    
 0.821
ENSNMLP00000020097
Mediator of RNA polymerase II transcription, subunit 18 homolog (yeast).
   
    0.808
ENSNMLP00000027485
SYF2 pre-mRNA-splicing factor.
   
 
 0.808
ENSNMLP00000016967
Peptidylprolyl isomerase (cyclophilin)-like 1.
    
  0.799
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.