STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC42EP4CDC42 effector protein 4. (149 aa)    
Predicted Functional Partners:
ENSNMLP00000016338
Zgc:63587.
    
 0.843
ENSNMLP00000022329
Septin 7b.
    
 0.805
ENSNMLP00000031619
Septin 15.
    
 0.805
ENSNMLP00000034772
annotation not available
    
 0.805
CDC42
Cell division cycle 42.
    
 0.770
ENSNMLP00000042889
annotation not available
    
 0.770
ENSNMLP00000001905
Ras homolog family member H.
    
 0.760
ENSNMLP00000039857
Ras homolog family member Q.
    
 0.760
ENSNMLP00000013718
Septin 10.
    
 
 0.712
ENSNMLP00000022946
BAR/IMD domain containing adaptor protein 2 like 1b.
   
 
 0.698
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.