STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3AUbiquitin protein ligase E3A. (869 aa)    
Predicted Functional Partners:
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.925
ENSNMLP00000001049
Proteasome 26S subunit, non-ATPase 4a.
    
 
 0.916
ENSNMLP00000026664
Proteasome 26S subunit, non-ATPase 4b.
    
 
 0.916
ENSNMLP00000009889
Proteasome 26S subunit, non-ATPase 14.
    
 
 0.888
ENSNMLP00000008422
Leucine rich repeat containing 1.
 
  
 0.883
ENSNMLP00000024377
Scribble planar cell polarity protein.
 
  
 0.883
ENSNMLP00000021935
Tumor protein p53.
    
 0.862
ENSNMLP00000005139
Nuclear transcription factor, X-box binding-like 1.
     
 0.854
ENSNMLP00000036648
Nuclear transcription factor, X-box binding 1.
     
 0.854
ENSNMLP00000018906
Ubiquitin protein ligase E3A.
  
  
 
0.838
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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