STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000003705F-box and leucine-rich repeat protein 3a. (437 aa)    
Predicted Functional Partners:
ENSNMLP00000013916
S-phase kinase-associated protein 1.
   
 0.853
ENSNMLP00000015878
Cullin 1a.
    
 0.760
ENSNMLP00000032621
Elongin C paralog a.
    
 0.677
ENSNMLP00000008687
COMM domain containing 4.
    
 0.666
ENSNMLP00000013790
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.664
ENSNMLP00000033246
annotation not available
    
 0.655
ENSNMLP00000033644
NEDD8 ubiquitin like modifier, like.
    
 0.655
ENSNMLP00000005029
CDK2 associated cullin domain 1.
    
 0.629
CUL3
Cullin 3.
    
 0.629
ENSNMLP00000030280
Cullin 3b.
    
 0.629
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.