STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000003756Calpain 1, (mu/I) large subunit a. (703 aa)    
Predicted Functional Partners:
ENSNMLP00000033726
annotation not available
   
 0.879
ENSNMLP00000041074
BCL2 associated X, apoptosis regulator a.
   
 0.841
ENSNMLP00000015253
Zgc:153993.
    
 0.820
ENSNMLP00000027230
annotation not available
    
 0.820
ENSNMLP00000038157
annotation not available
    
 0.820
ENSNMLP00000039578
annotation not available
    
 0.820
ENSNMLP00000043391
Zgc:55262.
  
 
 
0.805
ENSNMLP00000006152
annotation not available
   
0.768
ENSNMLP00000020101
Calpain, small subunit 1 b.
   
0.768
ENSNMLP00000032452
annotation not available
   
0.768
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.