STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000003955SRY-box transcription factor 10. (477 aa)    
Predicted Functional Partners:
ENSNMLP00000021763
Early growth response 2b.
    
 0.753
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.688
ENSNMLP00000006276
RUNX family transcription factor 2b.
   
 0.665
ENSNMLP00000027439
RUNX family transcription factor 3.
   
 0.665
ENSNMLP00000044768
RUNX family transcription factor 1.
   
 0.665
ENSNMLP00000010494
POU domain, class 5, transcription factor 3.
    
 0.659
ENSNMLP00000039167
annotation not available
   
 0.652
ENSNMLP00000018735
Forkhead box D3.
   
 0.633
ENSNMLP00000002135
Nuclear receptor subfamily 5, group A, member 2.
    
 0.626
ENSNMLP00000018997
Nuclear receptor subfamily 5, group A, member 1a.
    
 0.626
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.