STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000004052Transmembrane protein 147. (225 aa)    
Predicted Functional Partners:
ENSNMLP00000002825
Transmembrane and coiled-coil domains 1.
   
 
 0.949
ENSNMLP00000028575
Nicalin.
    
 
 0.949
ENSNMLP00000014986
Lin-54 DREAM MuvB core complex component.
   
 0.938
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 
 0.934
ENSNMLP00000017782
Lin-52 DREAM MuvB core complex component.
   
 0.895
ENSNMLP00000000678
Ribosomal protein L11.
   
 
 0.891
ENSNMLP00000010940
Lin-9 DREAM MuvB core complex component.
    
 0.891
ENSNMLP00000007928
Ribosomal protein L8.
   
   0.889
ENSNMLP00000034239
Ribosomal protein L38.
    
   0.887
ENSNMLP00000034273
Ribosomal protein L32.
    
   0.887
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.