STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000004155Calpain 7. (825 aa)    
Predicted Functional Partners:
ENSNMLP00000006152
annotation not available
   
 0.859
ENSNMLP00000020101
Calpain, small subunit 1 b.
   
 0.859
ENSNMLP00000032452
annotation not available
   
 0.859
ENSNMLP00000033726
annotation not available
    
 0.850
ENSNMLP00000019230
Programmed cell death 6.
   
 0.594
ENSNMLP00000021889
penta-EF-hand domain containing 1.
   
 0.594
ENSNMLP00000015441
annotation not available
   
 0.592
ENSNMLP00000020326
Grancalcin.
   
 0.592
ENSNMLP00000001411
annotation not available
    
 
 0.549
ENSNMLP00000016612
Oxidoreductase NAD-binding domain containing 1.
      
 0.513
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.