STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000004220Retinoid isomerohydrolase RPE65 a. (302 aa)    
Predicted Functional Partners:
ENSNMLP00000008194
Retinol dehydrogenase 5 (11-cis/9-cis).
   
 
 0.882
ENSNMLP00000039111
Retinol dehydrogenase 1.
   
 
 0.849
ENSNMLP00000032603
Retinol dehydrogenase 10a.
     
 0.845
ENSNMLP00000042027
Retinol dehydrogenase 20.
     
 0.845
ENSNMLP00000023489
annotation not available
     
 0.844
ENSNMLP00000002180
Lecithin retinol acyltransferase a.
     
 0.839
ENSNMLP00000002195
Lecithin retinol acyltransferase b, tandem duplicate 2.
     
 0.839
ENSNMLP00000005301
annotation not available
     
 0.839
ENSNMLP00000017334
Retinoid isomerohydrolase RPE65 b.
  
  
 
0.838
DGAT1
Diacylglycerol O-acyltransferase 1.
   
 
 0.825
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.