STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000004326Poly A binding protein, cytoplasmic 1 b. (641 aa)    
Predicted Functional Partners:
ENSNMLP00000017739
poly(A) specific ribonuclease subunit PAN3.
    
 0.962
ENSNMLP00000004249
poly(A) binding protein interacting protein 1.
   
 0.958
ENSNMLP00000033121
poly(A) specific ribonuclease subunit PAN2.
    
 0.952
ENSNMLP00000010072
Eukaryotic translation initiation factor 4A, isoform 2.
 
 
 0.938
ENSNMLP00000037547
annotation not available
 
 
 0.938
ENSNMLP00000042980
LSM1, U6 small nuclear RNA associated.
    
 0.933
ENSNMLP00000038420
Ataxin 2.
   
 
 0.927
ENSNMLP00000037698
Nuclear cap binding protein subunit 2.
   
 0.921
ENSNMLP00000016848
UPF1 RNA helicase and ATPase.
    
 0.919
ENSNMLP00000020627
annotation not available
   
 0.913
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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