Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ENSNMLP00000004249 | ENSNMLP00000004326 | poly(A) binding protein interacting protein 1. | Poly A binding protein, cytoplasmic 1 b. | 0.958 |
ENSNMLP00000004249 | ENSNMLP00000010072 | poly(A) binding protein interacting protein 1. | Eukaryotic translation initiation factor 4A, isoform 2. | 0.962 |
ENSNMLP00000004249 | ENSNMLP00000016848 | poly(A) binding protein interacting protein 1. | UPF1 RNA helicase and ATPase. | 0.810 |
ENSNMLP00000004249 | ENSNMLP00000017739 | poly(A) binding protein interacting protein 1. | poly(A) specific ribonuclease subunit PAN3. | 0.587 |
ENSNMLP00000004249 | ENSNMLP00000033121 | poly(A) binding protein interacting protein 1. | poly(A) specific ribonuclease subunit PAN2. | 0.587 |
ENSNMLP00000004249 | ENSNMLP00000037547 | poly(A) binding protein interacting protein 1. | annotation not available | 0.962 |
ENSNMLP00000004249 | ENSNMLP00000037698 | poly(A) binding protein interacting protein 1. | Nuclear cap binding protein subunit 2. | 0.916 |
ENSNMLP00000004249 | ENSNMLP00000038420 | poly(A) binding protein interacting protein 1. | Ataxin 2. | 0.488 |
ENSNMLP00000004249 | ENSNMLP00000042980 | poly(A) binding protein interacting protein 1. | LSM1, U6 small nuclear RNA associated. | 0.478 |
ENSNMLP00000004326 | ENSNMLP00000004249 | Poly A binding protein, cytoplasmic 1 b. | poly(A) binding protein interacting protein 1. | 0.958 |
ENSNMLP00000004326 | ENSNMLP00000010072 | Poly A binding protein, cytoplasmic 1 b. | Eukaryotic translation initiation factor 4A, isoform 2. | 0.938 |
ENSNMLP00000004326 | ENSNMLP00000016848 | Poly A binding protein, cytoplasmic 1 b. | UPF1 RNA helicase and ATPase. | 0.919 |
ENSNMLP00000004326 | ENSNMLP00000017739 | Poly A binding protein, cytoplasmic 1 b. | poly(A) specific ribonuclease subunit PAN3. | 0.962 |
ENSNMLP00000004326 | ENSNMLP00000020627 | Poly A binding protein, cytoplasmic 1 b. | annotation not available | 0.913 |
ENSNMLP00000004326 | ENSNMLP00000033121 | Poly A binding protein, cytoplasmic 1 b. | poly(A) specific ribonuclease subunit PAN2. | 0.952 |
ENSNMLP00000004326 | ENSNMLP00000037547 | Poly A binding protein, cytoplasmic 1 b. | annotation not available | 0.938 |
ENSNMLP00000004326 | ENSNMLP00000037698 | Poly A binding protein, cytoplasmic 1 b. | Nuclear cap binding protein subunit 2. | 0.921 |
ENSNMLP00000004326 | ENSNMLP00000038420 | Poly A binding protein, cytoplasmic 1 b. | Ataxin 2. | 0.927 |
ENSNMLP00000004326 | ENSNMLP00000042980 | Poly A binding protein, cytoplasmic 1 b. | LSM1, U6 small nuclear RNA associated. | 0.933 |
ENSNMLP00000010072 | ENSNMLP00000004249 | Eukaryotic translation initiation factor 4A, isoform 2. | poly(A) binding protein interacting protein 1. | 0.962 |
page 1 of 5