STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000004347Taspase, threonine aspartase, 1. (343 aa)    
Predicted Functional Partners:
ENSNMLP00000035486
Asparagine synthetase.
     
 0.860
ENSNMLP00000023572
annotation not available
    
 0.845
ENSNMLP00000036910
Glutamic-oxaloacetic transaminase 2b, mitochondrial.
   
 0.811
ENSNMLP00000003741
Sphingosine-1-phosphate lyase 1.
     
 0.810
ENSNMLP00000007444
Formimidoyltransferase cyclodeaminase.
     
 0.793
ENSNMLP00000029936
Agmatine ureohydrolase (agmatinase).
  
 
 0.723
ENSNMLP00000030377
Ornithine carbamoyltransferase.
     
 0.719
ENSNMLP00000036163
annotation not available
     
 0.716
ENSNMLP00000036164
annotation not available
     
 0.716
ENSNMLP00000002219
Phosphoribosyl pyrophosphate amidotransferase.
    
  0.711
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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