STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000004504BRD4 interacting chromatin remodeling complex associated protein. (1092 aa)    
Predicted Functional Partners:
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.976
ENSNMLP00000012027
annotation not available
    
 0.975
ENSNMLP00000018774
BAF chromatin remodeling complex subunit BCL7A.
    
 0.957
ENSNMLP00000004764
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
    
 0.953
ENSNMLP00000015851
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
    
 0.947
ENSNMLP00000036041
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b.
    
 0.947
ENSNMLP00000037844
annotation not available
    
 0.937
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
 0.937
ENSNMLP00000042030
Polybromo 1, like.
   
 0.935
ENSNMLP00000002357
Actin-like 6A.
    
 0.932
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.