STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000005301annotation not available (234 aa)    
Predicted Functional Partners:
ENSNMLP00000001544
Si:ch1073-13h15.3.
     
 0.855
ENSNMLP00000039107
Retinol saturase (all-trans-retinol 13,14-reductase).
     
 0.855
ENSNMLP00000021747
Cytochrome P450, family 26, subfamily A, polypeptide 1.
   
 
 0.854
ENSNMLP00000004220
Retinoid isomerohydrolase RPE65 a.
     
 0.839
ENSNMLP00000017334
Retinoid isomerohydrolase RPE65 b.
     
 0.839
ENSNMLP00000032603
Retinol dehydrogenase 10a.
     
 0.838
ENSNMLP00000042027
Retinol dehydrogenase 20.
     
 0.838
ENSNMLP00000015319
Short chain dehydrogenase/reductase family 16C, member 5a.
     
 0.837
ENSNMLP00000043271
Dehydrogenase/reductase (SDR family) member 3b.
     
 0.837
ENSNMLP00000003410
Zgc:109982.
     
 0.834
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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