STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000005435AT hook containing transcription factor 1. (2502 aa)    
Predicted Functional Partners:
ENSNMLP00000016115
Nucleoporin 160.
   
 0.995
ENSNMLP00000024835
Nucleoporin 107.
    
 0.995
ENSNMLP00000035805
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.995
ENSNMLP00000023615
Nucleoporin 43.
    
 0.994
ENSNMLP00000027529
SEH1-like (S. cerevisiae).
   
 0.994
ENSNMLP00000030116
Nucleoporin 85.
    
 0.994
ENSNMLP00000033131
Nucleoporin 98.
   
 0.994
ENSNMLP00000043841
Nucleoporin 37.
    
 0.994
ENSNMLP00000011321
Nucleoporin 93.
    
 0.985
ENSNMLP00000001120
Nucleoporin 35.
    
 0.983
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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