STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000005624Casein kinase 1, epsilon. (426 aa)    
Predicted Functional Partners:
ENSNMLP00000023209
LTV1 ribosome biogenesis factor.
    
 0.970
ENSNMLP00000006239
Casein kinase 1, alpha 1.
  
 
0.928
ENSNMLP00000017762
Bystin-like.
    
 0.925
ENSNMLP00000000721
TSR1 ribosome maturation factor.
    
 0.912
ENSNMLP00000023654
NIN1 (RPN12) binding protein 1 homolog.
    
 0.892
ENSNMLP00000016885
Axin 1.
    
 0.881
AXIN2
Axin 2.
    
 0.879
ENSNMLP00000020832
Axin 2 (conductin, axil).
    
 0.879
ENSNMLP00000004547
Period circadian clock 3.
    
 0.870
ENSNMLP00000009526
annotation not available
    
 0.870
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.