STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000005907Bardet-Biedl syndrome 12. (560 aa)    
Predicted Functional Partners:
ENSNMLP00000012965
McKusick-Kaufman syndrome.
    
 0.965
ENSNMLP00000010664
annotation not available
    
 0.963
ENSNMLP00000025008
T-complex 1.
    
 0.947
ENSNMLP00000022948
Chaperonin containing TCP1, subunit 6A (zeta 1).
    
 0.904
ENSNMLP00000033009
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 0.893
ENSNMLP00000033672
Chaperonin containing TCP1, subunit 7 (eta).
    
 0.893
ENSNMLP00000031060
Chaperonin containing TCP1, subunit 2 (beta).
    
 0.891
ENSNMLP00000008488
Chaperonin containing TCP1, subunit 4 (delta).
    
 0.890
ENSNMLP00000032818
Chaperonin containing TCP1, subunit 3 (gamma).
    
 0.889
ENSNMLP00000016342
Chaperonin containing TCP1, subunit 8 (theta).
    
 0.888
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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