STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA5Spermatogenesis associated 5. (861 aa)    
Predicted Functional Partners:
ENSNMLP00000020539
UBX domain protein 7.
   
 0.999
ENSNMLP00000007213
Derlin 1.
   
 0.978
ENSNMLP00000015273
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.978
ENSNMLP00000003144
Fas (TNFRSF6) associated factor 1.
   
 0.977
ENSNMLP00000006728
NSFL1 (p97) cofactor (p47).
   
 0.977
ENSNMLP00000031107
UBX domain protein 1.
    
 0.973
ENSNMLP00000040921
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
 0.963
ENSNMLP00000041629
Derlin 2.
   
 0.957
ENSNMLP00000042465
YOD1 deubiquitinase.
   
 0.956
ENSNMLP00000026687
Proteasome 26S subunit, non-ATPase 2.
   
 0.955
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.