STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000005998Opsin 8, group member a. (340 aa)    
Predicted Functional Partners:
ENSNMLP00000013318
Guanine nucleotide binding protein (G protein), gamma 13b.
    
  0.694
ENSNMLP00000000760
Guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1.
   
 0.669
ENSNMLP00000007467
annotation not available
    
  0.661
ENSNMLP00000010166
annotation not available
   
 0.659
ENSNMLP00000001209
Guanine nucleotide binding protein (G protein), gamma 10.
    
  0.641
ENSNMLP00000011718
Guanine nucleotide binding protein (G protein), gamma 8.
    
  0.641
ENSNMLP00000037915
Guanine nucleotide binding protein (G protein), gamma 3.
    
  0.641
ENSNMLP00000005409
annotation not available
   
 0.621
ENSNMLP00000006057
S-antigen; retina and pineal gland (arrestin) a.
   
 0.621
ENSNMLP00000023952
Arrestin 3a, retinal (X-arrestin).
   
 0.621
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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