STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000006332Short chain dehydrogenase/reductase family 42E, member 1. (384 aa)    
Predicted Functional Partners:
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.998
ENSNMLP00000000677
Cytochrome P450, family 51.
 
 0.960
ENSNMLP00000043739
annotation not available
  
 0.948
ENSNMLP00000007285
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.946
ENSNMLP00000026437
Squalene epoxidase a.
   
 
 0.945
ENSNMLP00000010471
Cytochrome P450, family 7, subfamily A, polypeptide 1.
  
 0.930
ENSNMLP00000018258
Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase).
  
 
 0.930
ENSNMLP00000006034
Sigma non-opioid intracellular receptor 1.
   
 
 0.921
ENSNMLP00000022349
Hydroxysteroid (17-beta) dehydrogenase 7.
   
 0.920
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.920
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.