STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000006563Chromosome 16 open reading frame 70. (405 aa)    
Predicted Functional Partners:
ENSNMLP00000014253
RAD21 cohesin complex component like 1.
 
   
  0.762
ENSNMLP00000021265
HESX homeobox 1.
    
   0.653
ENSNMLP00000027073
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
   0.653
RAD21
RAD21 cohesin complex component.
 
   
  0.641
ENSNMLP00000026280
DNA primase subunit 1.
 
      0.578
CASK
Calcium/calmodulin dependent serine protein kinase.
      
 0.533
ENSNMLP00000042466
Kinesin family member 17.
      
 0.518
WHAMM
WASP homolog associated with actin, golgi membranes and microtubules.
    
 
 0.491
ENSNMLP00000011469
Mitochondrial ribosomal protein L48.
      
 0.489
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.