ENSNMLP00000006876 protein (Neogobius melanostomus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000006876

annotation not available (1265 aa)

Predicted Functional Partners:

ENSNMLP00000012109

0.937

CNTN1

0.937

ENSNMLP00000023385

0.934

ENSNMLP00000041718

0.838

ENSNMLP00000005603

0.764

ENSNMLP00000000663

0.759

ENSNMLP00000003426

0.759

ENSNMLP00000009429

0.759

ENSNMLP00000032789

0.759

ENSNMLP00000033102

0.759

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CNTN1	ENSNMLP00000005603	ENSNMLP00000036027	ENSNMLP00000005603	Contactin 1.	Neuropilin 1a.	0.601
CNTN1	ENSNMLP00000006876	ENSNMLP00000036027	ENSNMLP00000006876	Contactin 1.	annotation not available	0.937
CNTN1	ENSNMLP00000023385	ENSNMLP00000036027	ENSNMLP00000023385	Contactin 1.	Contactin associated protein 1.	0.891
CNTN1	ENSNMLP00000041718	ENSNMLP00000036027	ENSNMLP00000041718	Contactin 1.	annotation not available	0.937
ENSNMLP00000000663	ENSNMLP00000005603	ENSNMLP00000000663	ENSNMLP00000005603	Contactin 5.	Neuropilin 1a.	0.601
ENSNMLP00000000663	ENSNMLP00000006876	ENSNMLP00000000663	ENSNMLP00000006876	Contactin 5.	annotation not available	0.759
ENSNMLP00000000663	ENSNMLP00000023385	ENSNMLP00000000663	ENSNMLP00000023385	Contactin 5.	Contactin associated protein 1.	0.596
ENSNMLP00000000663	ENSNMLP00000041718	ENSNMLP00000000663	ENSNMLP00000041718	Contactin 5.	annotation not available	0.827
ENSNMLP00000003426	ENSNMLP00000005603	ENSNMLP00000003426	ENSNMLP00000005603	Contactin 3a, tandem duplicate 2.	Neuropilin 1a.	0.601
ENSNMLP00000003426	ENSNMLP00000006876	ENSNMLP00000003426	ENSNMLP00000006876	Contactin 3a, tandem duplicate 2.	annotation not available	0.759
ENSNMLP00000003426	ENSNMLP00000023385	ENSNMLP00000003426	ENSNMLP00000023385	Contactin 3a, tandem duplicate 2.	Contactin associated protein 1.	0.596
ENSNMLP00000003426	ENSNMLP00000041718	ENSNMLP00000003426	ENSNMLP00000041718	Contactin 3a, tandem duplicate 2.	annotation not available	0.827
ENSNMLP00000005603	CNTN1	ENSNMLP00000005603	ENSNMLP00000036027	Neuropilin 1a.	Contactin 1.	0.601
ENSNMLP00000005603	ENSNMLP00000000663	ENSNMLP00000005603	ENSNMLP00000000663	Neuropilin 1a.	Contactin 5.	0.601
ENSNMLP00000005603	ENSNMLP00000003426	ENSNMLP00000005603	ENSNMLP00000003426	Neuropilin 1a.	Contactin 3a, tandem duplicate 2.	0.601
ENSNMLP00000005603	ENSNMLP00000006876	ENSNMLP00000005603	ENSNMLP00000006876	Neuropilin 1a.	annotation not available	0.764
ENSNMLP00000005603	ENSNMLP00000009429	ENSNMLP00000005603	ENSNMLP00000009429	Neuropilin 1a.	Contactin 3b.	0.601
ENSNMLP00000005603	ENSNMLP00000012109	ENSNMLP00000005603	ENSNMLP00000012109	Neuropilin 1a.	Contactin 1b.	0.601
ENSNMLP00000005603	ENSNMLP00000032789	ENSNMLP00000005603	ENSNMLP00000032789	Neuropilin 1a.	Contactin 3a, tandem duplicate 1.	0.601
ENSNMLP00000005603	ENSNMLP00000033102	ENSNMLP00000005603	ENSNMLP00000033102	Neuropilin 1a.	annotation not available	0.601