STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMU1SMU1 DNA replication regulator and spliceosomal factor. (504 aa)    
Predicted Functional Partners:
ENSNMLP00000031214
IK cytokine.
   
 0.994
ENSNMLP00000021950
Microfibril associated protein 1.
   
 0.993
ENSNMLP00000043892
Small nuclear ribonucleoprotein 200 (U5).
   
 0.988
ENSNMLP00000005926
pre-mRNA processing factor 8.
    
 0.986
ENSNMLP00000031152
LSM8 homolog, U6 small nuclear RNA associated.
   
  0.985
ENSNMLP00000007058
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.982
ENSNMLP00000040451
Elongation factor Tu GTP binding domain containing 2.
   
 0.979
ENSNMLP00000035266
annotation not available
   
 0.978
ENSNMLP00000025913
Splicing factor 3a, subunit 2.
    
 0.976
ENSNMLP00000020260
Splicing factor 3b, subunit 1.
   
 0.975
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.