STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000007423Josephin domain containing 1. (257 aa)    
Predicted Functional Partners:
ENSNMLP00000001704
Ubiquitin B.
   
 0.900
ENSNMLP00000001079
Ribosomal protein S27a.
   
 0.893
ENSNMLP00000007557
annotation not available
    
  0.824
ENSNMLP00000016684
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.824
ENSNMLP00000001681
annotation not available
    
  0.813
ENSNMLP00000007103
annotation not available
    
  0.813
ENSNMLP00000026141
annotation not available
    
  0.813
ENSNMLP00000000062
ISG15 ubiquitin like modifier.
   
 0.680
ENSNMLP00000000414
Zinc finger, AN1-type domain 4.
   
 0.680
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.680
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.