STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000007710PDZ domain containing 11. (145 aa)    
Predicted Functional Partners:
ENSNMLP00000038224
Tetraspanin 33a.
    
 0.933
ENSNMLP00000012863
Tetraspanin 33b.
    
 0.922
ENSNMLP00000004508
Pleckstrin homology domain containing, family A member 7b.
    
 0.912
ENSNMLP00000043653
ATPase copper transporting alpha.
    
 0.872
ENSNMLP00000013928
Voltage-dependent anion channel 1.
   
 
  0.848
ENSNMLP00000001086
SPG7 matrix AAA peptidase subunit, paraplegin.
    
  0.845
ENSNMLP00000001684
Eukaryotic translation initiation factor 1A X-linked a.
   
  
 0.810
ENSNMLP00000018415
ADAM metallopeptidase domain 10b.
     
 0.800
ENSNMLP00000033823
ADAM metallopeptidase domain 10a.
     
 0.800
ENSNMLP00000007054
Si:ch1073-174d20.2.
    
  0.798
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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