STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000007950Transient receptor potential cation channel, subfamily C, member 4b. (886 aa)    
Predicted Functional Partners:
ENSNMLP00000041714
Transient receptor potential cation channel, subfamily C, member 1.
  
 
0.904
ENSNMLP00000024531
annotation not available
    
 0.684
ENSNMLP00000031551
Bone morphogenetic protein receptor, type II a (serine/threonine kinase).
    
 0.684
ENSNMLP00000003487
annotation not available
    
 
 0.678
ENSNMLP00000039914
Calmodulin 2a (phosphorylase kinase, delta).
    
 
 0.678
ENSNMLP00000004158
annotation not available
   
 0.664
ENSNMLP00000031957
annotation not available
   
 0.664
ENSNMLP00000036923
Ligand of numb-protein X 2b.
   
 0.664
ENSNMLP00000040361
annotation not available
   
 0.664
ENSNMLP00000011870
Protein kinase C, gamma.
   
 0.641
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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