STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000008194Retinol dehydrogenase 5 (11-cis/9-cis). (332 aa)    
Predicted Functional Partners:
ENSNMLP00000004220
Retinoid isomerohydrolase RPE65 a.
   
 
 0.882
ENSNMLP00000017334
Retinoid isomerohydrolase RPE65 b.
   
 
 0.867
ENSNMLP00000034420
Aldehyde dehydrogenase 1 family, member A2.
   
 
 0.852
ENSNMLP00000032603
Retinol dehydrogenase 10a.
     
0.850
ENSNMLP00000042027
Retinol dehydrogenase 20.
     
 0.849
DGAT1
Diacylglycerol O-acyltransferase 1.
   
 
 0.834
ENSNMLP00000009843
Diacylglycerol O-acyltransferase 1b.
   
 
 0.834
ENSNMLP00000002180
Lecithin retinol acyltransferase a.
     
 0.832
ENSNMLP00000005301
annotation not available
     
 0.832
ENSNMLP00000042752
Si:ch211-107o10.3.
   
 
 0.811
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.