STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000008334Serine palmitoyltransferase, small subunit A. (68 aa)    
Predicted Functional Partners:
ENSNMLP00000018335
ORMDL sphingolipid biosynthesis regulator 1.
    
 0.966
ENSNMLP00000027713
ORMDL sphingolipid biosynthesis regulator 3.
    
 0.947
ENSNMLP00000033110
annotation not available
    
 0.947
ENSNMLP00000004357
Isthmin 1.
    
 0.938
ENSNMLP00000011714
Serine palmitoyltransferase, long chain base subunit 3.
    
 0.938
ENSNMLP00000030311
Serine palmitoyltransferase, long chain base subunit 2b.
    
 0.938
ENSNMLP00000042433
Serine palmitoyltransferase, long chain base subunit 2a.
    
 0.938
ENSNMLP00000023551
Isthmin 2b.
    
 0.928
ENSNMLP00000014589
Serine palmitoyltransferase, small subunit B.
  
  
0.918
ENSNMLP00000009827
Aminolevulinate, delta-, synthase 2.
    
 0.764
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.